Reproducibility

Package location

The computational artifact is stored in:

  • final_paper/

Main files

  • final_paper/lattice_core.py
  • final_paper/calc_single_case.py
  • final_paper/calc_phase_grid.py
  • final_paper/calc_alias_decoder.py
  • final_paper/calc_boundary_size_sweep.py
  • final_paper/calc_seed_statistics.py
  • final_paper/plot_lattice_validation.py
  • final_paper/run_all_repro.sh
  • final_paper/README_reproducibility.md
  • final_paper/SUPPLEMENTARY_METHODS.md

Run everything

From the repository root:

bash final_paper/run_all_repro.sh

Outputs

Running the package regenerates:

  • single-case time series and summary metrics,
  • coarse phase-grid outputs,
  • alias-decoder metrics,
  • boundary-size sweep outputs,
  • multi-seed summary statistics,
  • reproducible figure assets.

Environment

You can use either:

  • final_paper/requirements.txt
  • final_paper/environment.yml

Important boundary

The package is intended to support computational replication of the reported toy-model results. It is not, by itself, empirical confirmation of literal holographic-brain implementation or extraordinary ontological claims.


Maintained by Alberto Cardenas. Contact: iam@albertocardenas.com

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